Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DQB1P01920 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DQB1P01920 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 GPX1-201ENST00000419349 1106 ntBASIC19.15■□□□□ 0.66
HLA-DQB1P01920 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DQB1P01920 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
HLA-DQB1P01920 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DQB1P01920 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DQB1P01920 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.66
HLA-DQB1P01920 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DQB1P01920 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 MIR4449-201ENST00000578365 66 ntBASIC19.13■□□□□ 0.65
HLA-DQB1P01920 AC131274.2-201ENST00000580697 1507 ntBASIC19.13■□□□□ 0.65
HLA-DQB1P01920 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQB1P01920 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 AC087742.1-201ENST00000575880 1738 ntBASIC19.12■□□□□ 0.65
HLA-DQB1P01920 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 AL592295.1-201ENST00000400984 884 ntBASIC19.12■□□□□ 0.65
HLA-DQB1P01920 RPS2P7-201ENST00000447334 885 ntBASIC19.12■□□□□ 0.65
HLA-DQB1P01920 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQB1P01920 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DQB1P01920 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 AC009831.1-201ENST00000580420 1582 ntBASIC19.1■□□□□ 0.65
HLA-DQB1P01920 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQB1P01920 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms