Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC026202.3-201ENST00000600805 1127 ntBASIC18.63■□□□□ 0.57
HLA-AP01891 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-AP01891 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-AP01891 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HLA-AP01891 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HLA-AP01891 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-AP01891 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-AP01891 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
HLA-AP01891 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-AP01891 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-AP01891 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HLA-AP01891 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-AP01891 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-AP01891 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HLA-AP01891 AC133552.2-201ENST00000619106 1032 ntBASIC18.62■□□□□ 0.57
HLA-AP01891 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-AP01891 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 ALDH1A3-203ENST00000557963 1670 ntBASIC18.62■□□□□ 0.57
HLA-AP01891 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-AP01891 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-AP01891 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HLA-AP01891 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 AC079630.1-202ENST00000618127 1840 ntBASIC18.61■□□□□ 0.57
HLA-AP01891 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HLA-AP01891 AC009831.1-201ENST00000580420 1582 ntBASIC18.61■□□□□ 0.57
HLA-AP01891 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-AP01891 AC080038.3-201ENST00000623346 1952 ntBASIC18.61■□□□□ 0.57
HLA-AP01891 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HLA-AP01891 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HLA-AP01891 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-AP01891 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-AP01891 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-AP01891 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-AP01891 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-AP01891 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-AP01891 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HLA-AP01891 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 RAP2CP1-202ENST00000605179 643 ntBASIC18.59■□□□□ 0.57
HLA-AP01891 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-AP01891 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-AP01891 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-AP01891 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HLA-AP01891 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-AP01891 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-AP01891 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.58■□□□□ 0.56
HLA-AP01891 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-AP01891 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-AP01891 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-AP01891 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-AP01891 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-AP01891 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-AP01891 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HLA-AP01891 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-AP01891 U85056.1-201ENST00000616429 682 ntBASIC18.57■□□□□ 0.56
HLA-AP01891 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-AP01891 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HLA-AP01891 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-AP01891 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms