Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CLPTM1O96005 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1O96005 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1O96005 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.8■□□□□ 0.92
CLPTM1O96005 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.8■□□□□ 0.92
CLPTM1O96005 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.8■□□□□ 0.92
CLPTM1O96005 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1O96005 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 AC139530.1-201ENST00000575312 1977 ntBASIC20.79■□□□□ 0.92
CLPTM1O96005 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.79■□□□□ 0.92
CLPTM1O96005 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLPTM1O96005 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.79■□□□□ 0.92
CLPTM1O96005 AC129492.7-201ENST00000622992 756 ntBASIC20.79■□□□□ 0.92
CLPTM1O96005 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1O96005 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPTM1O96005 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLPTM1O96005 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPTM1O96005 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPTM1O96005 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.78■□□□□ 0.92
CLPTM1O96005 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLPTM1O96005 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLPTM1O96005 AC012354.3-201ENST00000623734 483 ntBASIC20.78■□□□□ 0.92
CLPTM1O96005 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLPTM1O96005 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLPTM1O96005 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLPTM1O96005 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLPTM1O96005 SPCS2P3-201ENST00000500401 656 ntBASIC20.77■□□□□ 0.92
CLPTM1O96005 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CLPTM1O96005 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLPTM1O96005 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
CLPTM1O96005 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
CLPTM1O96005 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLPTM1O96005 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPTM1O96005 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLPTM1O96005 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 AC004987.1-201ENST00000428627 508 ntBASIC20.75■□□□□ 0.91
CLPTM1O96005 AL033527.3-201ENST00000566366 1196 ntBASIC20.75■□□□□ 0.91
CLPTM1O96005 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.75■□□□□ 0.91
CLPTM1O96005 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CLPTM1O96005 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLPTM1O96005 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.75■□□□□ 0.91
CLPTM1O96005 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLPTM1O96005 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 DUX4L9-201ENST00000449051 1259 ntBASIC20.74■□□□□ 0.91
CLPTM1O96005 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 DUX4L18-201ENST00000553347 1267 ntBASIC20.74■□□□□ 0.91
CLPTM1O96005 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.74■□□□□ 0.91
CLPTM1O96005 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPTM1O96005 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.74■□□□□ 0.91
CLPTM1O96005 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLPTM1O96005 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLPTM1O96005 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLPTM1O96005 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.73■□□□□ 0.91
CLPTM1O96005 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLPTM1O96005 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLPTM1O96005 ATP5G2P3-201ENST00000429083 425 ntBASIC20.73■□□□□ 0.91
CLPTM1O96005 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLPTM1O96005 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLPTM1O96005 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLPTM1O96005 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLPTM1O96005 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms