Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
GGPS1O95749 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
GGPS1O95749 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.97■■□□□ 1.59
GGPS1O95749 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.97■■□□□ 1.59
GGPS1O95749 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.97■■□□□ 1.59
GGPS1O95749 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.97■■□□□ 1.59
GGPS1O95749 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
GGPS1O95749 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
GGPS1O95749 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
GGPS1O95749 YBX1P1-201ENST00000445822 960 ntBASIC24.96■■□□□ 1.59
GGPS1O95749 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
GGPS1O95749 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.96■■□□□ 1.59
GGPS1O95749 MIR6084-201ENST00000622012 110 ntBASIC24.96■■□□□ 1.59
GGPS1O95749 AL358852.1-201ENST00000623174 1268 ntBASIC24.96■■□□□ 1.59
GGPS1O95749 AL031602.1-201ENST00000633169 911 ntBASIC24.96■■□□□ 1.59
GGPS1O95749 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
GGPS1O95749 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
GGPS1O95749 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.96■■□□□ 1.59
GGPS1O95749 AC012414.1-201ENST00000556676 535 ntBASIC24.95■■□□□ 1.58
GGPS1O95749 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.95■■□□□ 1.58
GGPS1O95749 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
GGPS1O95749 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
GGPS1O95749 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
GGPS1O95749 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.94■■□□□ 1.58
GGPS1O95749 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 AP005435.1-201ENST00000529293 1178 ntBASIC24.94■■□□□ 1.58
GGPS1O95749 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
GGPS1O95749 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
GGPS1O95749 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.93■■□□□ 1.58
GGPS1O95749 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.93■■□□□ 1.58
GGPS1O95749 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.93■■□□□ 1.58
GGPS1O95749 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.93■■□□□ 1.58
GGPS1O95749 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.93■■□□□ 1.58
GGPS1O95749 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GGPS1O95749 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
GGPS1O95749 AC027612.3-201ENST00000413684 1047 ntBASIC24.92■■□□□ 1.58
GGPS1O95749 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
GGPS1O95749 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.92■■□□□ 1.58
GGPS1O95749 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.92■■□□□ 1.58
GGPS1O95749 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.91■■□□□ 1.58
GGPS1O95749 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
GGPS1O95749 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.91■■□□□ 1.58
GGPS1O95749 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.91■■□□□ 1.58
GGPS1O95749 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.91■■□□□ 1.58
GGPS1O95749 AC034268.1-201ENST00000441047 882 ntBASIC24.91■■□□□ 1.58
GGPS1O95749 AL354811.1-201ENST00000610286 706 ntBASIC24.91■■□□□ 1.58
GGPS1O95749 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.91■■□□□ 1.58
GGPS1O95749 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
GGPS1O95749 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
GGPS1O95749 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
GGPS1O95749 AL353803.4-201ENST00000565882 1934 ntBASIC24.9■■□□□ 1.58
GGPS1O95749 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
GGPS1O95749 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
GGPS1O95749 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.9■■□□□ 1.58
GGPS1O95749 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.9■■□□□ 1.58
GGPS1O95749 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.9■■□□□ 1.58
GGPS1O95749 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.9■■□□□ 1.58
GGPS1O95749 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
GGPS1O95749 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.9■■□□□ 1.58
GGPS1O95749 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
GGPS1O95749 AC004687.1-201ENST00000579003 1625 ntBASIC24.9■■□□□ 1.58
GGPS1O95749 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
GGPS1O95749 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
GGPS1O95749 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
GGPS1O95749 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.89■■□□□ 1.58
GGPS1O95749 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
GGPS1O95749 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
GGPS1O95749 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
GGPS1O95749 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.89■■□□□ 1.58
GGPS1O95749 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.89■■□□□ 1.58
GGPS1O95749 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
GGPS1O95749 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
GGPS1O95749 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
GGPS1O95749 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
GGPS1O95749 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
GGPS1O95749 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
GGPS1O95749 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
GGPS1O95749 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.88■■□□□ 1.57
GGPS1O95749 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.88■■□□□ 1.57
GGPS1O95749 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms