Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 AC026310.3-201ENST00000625186 2373 ntBASIC18.8■□□□□ 0.6
RAB3DO95716 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 ABHD17AP4-201ENST00000411545 909 ntBASIC18.8■□□□□ 0.6
RAB3DO95716 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB3DO95716 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB3DO95716 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3DO95716 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB3DO95716 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3DO95716 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB3DO95716 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3DO95716 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB3DO95716 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB3DO95716 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3DO95716 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3DO95716 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB3DO95716 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3DO95716 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3DO95716 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB3DO95716 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAB3DO95716 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3DO95716 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3DO95716 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RAB3DO95716 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 AL353803.4-201ENST00000565882 1934 ntBASIC18.78■□□□□ 0.6
RAB3DO95716 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3DO95716 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3DO95716 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3DO95716 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3DO95716 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3DO95716 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB3DO95716 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3DO95716 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RAB3DO95716 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB3DO95716 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3DO95716 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3DO95716 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB3DO95716 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
RAB3DO95716 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB3DO95716 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RAB3DO95716 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3DO95716 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB3DO95716 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB3DO95716 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3DO95716 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3DO95716 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB3DO95716 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB3DO95716 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RAB3DO95716 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB3DO95716 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3DO95716 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB3DO95716 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB3DO95716 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB3DO95716 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3DO95716 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB3DO95716 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB3DO95716 AC009831.1-201ENST00000580420 1582 ntBASIC18.73■□□□□ 0.59
RAB3DO95716 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms