Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL1O75677 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.26■■□□□ 1.15
RFPL1O75677 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL1O75677 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.26■■□□□ 1.15
RFPL1O75677 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.26■■□□□ 1.15
RFPL1O75677 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.26■■□□□ 1.15
RFPL1O75677 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL1O75677 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL1O75677 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL1O75677 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL1O75677 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.25■■□□□ 1.15
RFPL1O75677 AC137630.3-201ENST00000607245 391 ntBASIC22.25■■□□□ 1.15
RFPL1O75677 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.25■■□□□ 1.15
RFPL1O75677 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL1O75677 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.25■■□□□ 1.15
RFPL1O75677 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RFPL1O75677 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL1O75677 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL1O75677 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RFPL1O75677 AC007375.3-201ENST00000600936 2314 ntBASIC22.24■■□□□ 1.15
RFPL1O75677 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL1O75677 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RFPL1O75677 MIR935-201ENST00000401179 91 ntBASIC22.24■■□□□ 1.15
RFPL1O75677 TSPY9P-201ENST00000440215 945 ntBASIC22.24■■□□□ 1.15
RFPL1O75677 TSPY11P-201ENST00000442607 1045 ntBASIC22.24■■□□□ 1.15
RFPL1O75677 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.24■■□□□ 1.15
RFPL1O75677 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.24■■□□□ 1.15
RFPL1O75677 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.24■■□□□ 1.15
RFPL1O75677 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RFPL1O75677 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL1O75677 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL1O75677 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RFPL1O75677 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
RFPL1O75677 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
RFPL1O75677 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
RFPL1O75677 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFPL1O75677 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RFPL1O75677 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.22■■□□□ 1.15
RFPL1O75677 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
RFPL1O75677 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.22■■□□□ 1.15
RFPL1O75677 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RFPL1O75677 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RFPL1O75677 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL1O75677 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RFPL1O75677 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
RFPL1O75677 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL1O75677 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
RFPL1O75677 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
RFPL1O75677 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.21■■□□□ 1.15
RFPL1O75677 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.21■■□□□ 1.15
RFPL1O75677 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.21■■□□□ 1.15
RFPL1O75677 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.21■■□□□ 1.15
RFPL1O75677 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.21■■□□□ 1.15
RFPL1O75677 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
RFPL1O75677 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
RFPL1O75677 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RFPL1O75677 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.2■■□□□ 1.14
RFPL1O75677 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 AC080038.3-201ENST00000623346 1952 ntBASIC22.2■■□□□ 1.14
RFPL1O75677 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.2■■□□□ 1.14
RFPL1O75677 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.2■■□□□ 1.14
RFPL1O75677 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.2■■□□□ 1.14
RFPL1O75677 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.2■■□□□ 1.14
RFPL1O75677 AC021242.3-201ENST00000607598 1377 ntBASIC22.2■■□□□ 1.14
RFPL1O75677 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RFPL1O75677 AC087742.1-201ENST00000575880 1738 ntBASIC22.2■■□□□ 1.14
RFPL1O75677 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL1O75677 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RFPL1O75677 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.19■■□□□ 1.14
RFPL1O75677 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RFPL1O75677 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL1O75677 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL1O75677 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL1O75677 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL1O75677 AC092053.2-201ENST00000640557 1818 ntBASIC22.19■■□□□ 1.14
RFPL1O75677 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.19■■□□□ 1.14
RFPL1O75677 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL1O75677 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RFPL1O75677 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL1O75677 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.18■■□□□ 1.14
RFPL1O75677 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL1O75677 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.18■■□□□ 1.14
RFPL1O75677 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL1O75677 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL1O75677 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms