Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ALDH1A3-203ENST00000557963 1670 ntBASIC20.58■□□□□ 0.89
HCN1O60741 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
HCN1O60741 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCN1O60741 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCN1O60741 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.58■□□□□ 0.89
HCN1O60741 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.58■□□□□ 0.89
HCN1O60741 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HCN1O60741 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HCN1O60741 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HCN1O60741 AC005837.3-201ENST00000612163 286 ntBASIC20.58■□□□□ 0.89
HCN1O60741 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HCN1O60741 AC106739.1-201ENST00000617035 715 ntBASIC20.58■□□□□ 0.89
HCN1O60741 DUSP8P3-201ENST00000399571 1760 ntBASIC20.58■□□□□ 0.89
HCN1O60741 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCN1O60741 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCN1O60741 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
HCN1O60741 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.58■□□□□ 0.88
HCN1O60741 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HCN1O60741 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HCN1O60741 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCN1O60741 UNC93B3-201ENST00000308076 687 ntBASIC20.57■□□□□ 0.88
HCN1O60741 PBX2P1-201ENST00000493219 1291 ntBASIC20.57■□□□□ 0.88
HCN1O60741 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
HCN1O60741 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
HCN1O60741 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.57■□□□□ 0.88
HCN1O60741 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCN1O60741 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCN1O60741 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HCN1O60741 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HCN1O60741 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.56■□□□□ 0.88
HCN1O60741 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.56■□□□□ 0.88
HCN1O60741 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.56■□□□□ 0.88
HCN1O60741 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
HCN1O60741 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.56■□□□□ 0.88
HCN1O60741 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.56■□□□□ 0.88
HCN1O60741 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HCN1O60741 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCN1O60741 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 AL136162.1-201ENST00000607711 1078 ntBASIC20.55■□□□□ 0.88
HCN1O60741 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.55■□□□□ 0.88
HCN1O60741 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCN1O60741 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HCN1O60741 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HCN1O60741 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HCN1O60741 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HCN1O60741 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.54■□□□□ 0.88
HCN1O60741 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.54■□□□□ 0.88
HCN1O60741 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HCN1O60741 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.54■□□□□ 0.88
HCN1O60741 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.54■□□□□ 0.88
HCN1O60741 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCN1O60741 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.54■□□□□ 0.88
HCN1O60741 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCN1O60741 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.53■□□□□ 0.88
HCN1O60741 AC009102.2-201ENST00000606772 1639 ntBASIC20.53■□□□□ 0.88
HCN1O60741 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HCN1O60741 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.53■□□□□ 0.88
HCN1O60741 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.53■□□□□ 0.88
HCN1O60741 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.53■□□□□ 0.88
HCN1O60741 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.53■□□□□ 0.88
HCN1O60741 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.53■□□□□ 0.88
HCN1O60741 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCN1O60741 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCN1O60741 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
HCN1O60741 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCN1O60741 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCN1O60741 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
HCN1O60741 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HCN1O60741 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HCN1O60741 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
HCN1O60741 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCN1O60741 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
HCN1O60741 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
HCN1O60741 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
HCN1O60741 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HCN1O60741 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.51■□□□□ 0.87
HCN1O60741 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms