Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.92■■□□□ 1.1
GFRA3O60609 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.92■■□□□ 1.1
GFRA3O60609 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.92■■□□□ 1.1
GFRA3O60609 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.92■■□□□ 1.1
GFRA3O60609 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GFRA3O60609 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.92■■□□□ 1.1
GFRA3O60609 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GFRA3O60609 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.91■■□□□ 1.1
GFRA3O60609 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GFRA3O60609 AC079140.4-201ENST00000507448 529 ntBASIC21.91■■□□□ 1.1
GFRA3O60609 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.91■■□□□ 1.1
GFRA3O60609 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GFRA3O60609 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
GFRA3O60609 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GFRA3O60609 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.9■■□□□ 1.1
GFRA3O60609 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.9■■□□□ 1.1
GFRA3O60609 AC008550.1-201ENST00000511500 884 ntBASIC21.9■■□□□ 1.1
GFRA3O60609 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GFRA3O60609 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.9■■□□□ 1.1
GFRA3O60609 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GFRA3O60609 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GFRA3O60609 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
GFRA3O60609 ABCB10P1-201ENST00000614297 2181 ntBASIC21.89■■□□□ 1.1
GFRA3O60609 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
GFRA3O60609 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.89■■□□□ 1.1
GFRA3O60609 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.89■■□□□ 1.09
GFRA3O60609 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GFRA3O60609 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GFRA3O60609 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GFRA3O60609 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.89■■□□□ 1.09
GFRA3O60609 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
GFRA3O60609 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
GFRA3O60609 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
GFRA3O60609 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
GFRA3O60609 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.89■■□□□ 1.09
GFRA3O60609 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.89■■□□□ 1.09
GFRA3O60609 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
GFRA3O60609 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GFRA3O60609 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
GFRA3O60609 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.88■■□□□ 1.09
GFRA3O60609 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.88■■□□□ 1.09
GFRA3O60609 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.88■■□□□ 1.09
GFRA3O60609 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.88■■□□□ 1.09
GFRA3O60609 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
GFRA3O60609 AC006058.3-201ENST00000606217 1069 ntBASIC21.88■■□□□ 1.09
GFRA3O60609 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.88■■□□□ 1.09
GFRA3O60609 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GFRA3O60609 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GFRA3O60609 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GFRA3O60609 AC211429.1-201ENST00000415277 523 ntBASIC21.87■■□□□ 1.09
GFRA3O60609 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.87■■□□□ 1.09
GFRA3O60609 KRT18P21-201ENST00000515767 1272 ntBASIC21.87■■□□□ 1.09
GFRA3O60609 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GFRA3O60609 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.87■■□□□ 1.09
GFRA3O60609 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
GFRA3O60609 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GFRA3O60609 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.87■■□□□ 1.09
GFRA3O60609 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GFRA3O60609 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.86■■□□□ 1.09
GFRA3O60609 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
GFRA3O60609 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.86■■□□□ 1.09
GFRA3O60609 AC128676.1-201ENST00000454392 318 ntBASIC21.86■■□□□ 1.09
GFRA3O60609 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.86■■□□□ 1.09
GFRA3O60609 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GFRA3O60609 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GFRA3O60609 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GFRA3O60609 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
GFRA3O60609 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.85■■□□□ 1.09
GFRA3O60609 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.85■■□□□ 1.09
GFRA3O60609 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.85■■□□□ 1.09
GFRA3O60609 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
GFRA3O60609 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.85■■□□□ 1.09
GFRA3O60609 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.85■■□□□ 1.09
GFRA3O60609 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GFRA3O60609 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GFRA3O60609 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GFRA3O60609 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.85■■□□□ 1.09
GFRA3O60609 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GFRA3O60609 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
GFRA3O60609 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
GFRA3O60609 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GFRA3O60609 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.84■■□□□ 1.09
GFRA3O60609 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.84■■□□□ 1.09
GFRA3O60609 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.84■■□□□ 1.09
GFRA3O60609 UBE2DNL-204ENST00000602536 740 ntBASIC21.84■■□□□ 1.09
GFRA3O60609 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GFRA3O60609 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
GFRA3O60609 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.83■■□□□ 1.09
GFRA3O60609 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.83■■□□□ 1.09
GFRA3O60609 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.83■■□□□ 1.09
GFRA3O60609 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms