Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.85■□□□□ 0.77
CXCL13O43927 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCL13O43927 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.85■□□□□ 0.77
CXCL13O43927 SUDS3P1-201ENST00000505831 966 ntBASIC19.85■□□□□ 0.77
CXCL13O43927 AP001330.3-201ENST00000520123 633 ntBASIC19.85■□□□□ 0.77
CXCL13O43927 AC008764.7-201ENST00000593779 1081 ntBASIC19.85■□□□□ 0.77
CXCL13O43927 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CXCL13O43927 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL13O43927 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.85■□□□□ 0.77
CXCL13O43927 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCL13O43927 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCL13O43927 AC019069.1-201ENST00000610008 1333 ntBASIC19.84■□□□□ 0.77
CXCL13O43927 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL13O43927 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
CXCL13O43927 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCL13O43927 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.84■□□□□ 0.77
CXCL13O43927 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL13O43927 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CXCL13O43927 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CXCL13O43927 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL13O43927 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL13O43927 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.84■□□□□ 0.77
CXCL13O43927 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCL13O43927 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.83■□□□□ 0.77
CXCL13O43927 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL13O43927 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCL13O43927 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.83■□□□□ 0.77
CXCL13O43927 MIR939-201ENST00000401314 82 ntBASIC19.83■□□□□ 0.77
CXCL13O43927 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.83■□□□□ 0.77
CXCL13O43927 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CXCL13O43927 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CXCL13O43927 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CXCL13O43927 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CXCL13O43927 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 BX842568.3-201ENST00000418104 571 ntBASIC19.82■□□□□ 0.76
CXCL13O43927 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 SLC47A1P1-202ENST00000449666 945 ntBASIC19.82■□□□□ 0.76
CXCL13O43927 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.82■□□□□ 0.76
CXCL13O43927 AL136967.2-201ENST00000623968 743 ntBASIC19.82■□□□□ 0.76
CXCL13O43927 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 DUSP8P3-201ENST00000399571 1760 ntBASIC19.82■□□□□ 0.76
CXCL13O43927 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
CXCL13O43927 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCL13O43927 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CXCL13O43927 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.81■□□□□ 0.76
CXCL13O43927 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CXCL13O43927 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CXCL13O43927 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CXCL13O43927 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.81■□□□□ 0.76
CXCL13O43927 AC010525.1-201ENST00000585559 441 ntBASIC19.81■□□□□ 0.76
CXCL13O43927 AC233992.3-201ENST00000607491 485 ntBASIC19.81■□□□□ 0.76
CXCL13O43927 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.81■□□□□ 0.76
CXCL13O43927 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCL13O43927 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.81■□□□□ 0.76
CXCL13O43927 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CXCL13O43927 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CXCL13O43927 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 AC099791.1-201ENST00000416440 715 ntBASIC19.8■□□□□ 0.76
CXCL13O43927 OR2I1P-207ENST00000453522 948 ntBASIC19.8■□□□□ 0.76
CXCL13O43927 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CXCL13O43927 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
CXCL13O43927 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.8■□□□□ 0.76
CXCL13O43927 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CXCL13O43927 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CXCL13O43927 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCL13O43927 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.79■□□□□ 0.76
CXCL13O43927 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CXCL13O43927 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.79■□□□□ 0.76
CXCL13O43927 AC091305.1-201ENST00000479476 895 ntBASIC19.79■□□□□ 0.76
CXCL13O43927 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.79■□□□□ 0.76
CXCL13O43927 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CXCL13O43927 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCL13O43927 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms