Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF3IP2O43734 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 AL499627.2-201ENST00000606283 725 ntBASIC19.74■□□□□ 0.75
TRAF3IP2O43734 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF3IP2O43734 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF3IP2O43734 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAF3IP2O43734 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF3IP2O43734 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF3IP2O43734 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 AC004687.1-201ENST00000579003 1625 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 AC092171.4-201ENST00000609130 632 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 pRNA.6-201ENST00000610482 90 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 pRNA.5-201ENST00000612139 90 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 pRNA.11-201ENST00000618423 90 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 pRNA.13-201ENST00000619112 90 ntBASIC19.69■□□□□ 0.74
TRAF3IP2O43734 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF3IP2O43734 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF3IP2O43734 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms