Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.98■□□□□ 0.79
SMAD9O15198 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMAD9O15198 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SMAD9O15198 LINC01529-204ENST00000636474 1715 ntBASIC19.97■□□□□ 0.79
SMAD9O15198 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.97■□□□□ 0.79
SMAD9O15198 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMAD9O15198 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.97■□□□□ 0.79
SMAD9O15198 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD9O15198 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SMAD9O15198 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD9O15198 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD9O15198 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.96■□□□□ 0.79
SMAD9O15198 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD9O15198 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.96■□□□□ 0.79
SMAD9O15198 DUX4L4-201ENST00000566884 1269 ntBASIC19.96■□□□□ 0.79
SMAD9O15198 AL353803.4-201ENST00000565882 1934 ntBASIC19.96■□□□□ 0.79
SMAD9O15198 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.95■□□□□ 0.78
SMAD9O15198 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD9O15198 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SMAD9O15198 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SMAD9O15198 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD9O15198 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
SMAD9O15198 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.95■□□□□ 0.78
SMAD9O15198 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD9O15198 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD9O15198 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SMAD9O15198 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SMAD9O15198 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD9O15198 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD9O15198 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SMAD9O15198 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
SMAD9O15198 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD9O15198 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.94■□□□□ 0.78
SMAD9O15198 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.94■□□□□ 0.78
SMAD9O15198 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMAD9O15198 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.94■□□□□ 0.78
SMAD9O15198 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD9O15198 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
SMAD9O15198 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.93■□□□□ 0.78
SMAD9O15198 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SMAD9O15198 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
SMAD9O15198 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMAD9O15198 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.93■□□□□ 0.78
SMAD9O15198 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.93■□□□□ 0.78
SMAD9O15198 AC096631.2-201ENST00000436136 790 ntBASIC19.93■□□□□ 0.78
SMAD9O15198 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.93■□□□□ 0.78
SMAD9O15198 DUX4L19-201ENST00000557448 1267 ntBASIC19.93■□□□□ 0.78
SMAD9O15198 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SMAD9O15198 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
SMAD9O15198 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
SMAD9O15198 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMAD9O15198 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.92■□□□□ 0.78
SMAD9O15198 SYT6-210ENST00000641643 1587 ntBASIC19.92■□□□□ 0.78
SMAD9O15198 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.92■□□□□ 0.78
SMAD9O15198 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.92■□□□□ 0.78
SMAD9O15198 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD9O15198 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD9O15198 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMAD9O15198 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms