Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFSF11O14788 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFSF11O14788 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
TNFSF11O14788 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF11O14788 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF11O14788 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.91■□□□□ 0.78
TNFSF11O14788 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TNFSF11O14788 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFSF11O14788 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 DUSP8P3-201ENST00000399571 1760 ntBASIC19.9■□□□□ 0.78
TNFSF11O14788 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.9■□□□□ 0.78
TNFSF11O14788 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF11O14788 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
TNFSF11O14788 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF11O14788 AC005837.3-201ENST00000612163 286 ntBASIC19.9■□□□□ 0.78
TNFSF11O14788 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF11O14788 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TNFSF11O14788 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFSF11O14788 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFSF11O14788 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFSF11O14788 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF11O14788 EDA-201ENST00000338901 1233 ntBASIC19.89■□□□□ 0.77
TNFSF11O14788 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF11O14788 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.89■□□□□ 0.77
TNFSF11O14788 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFSF11O14788 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFSF11O14788 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFSF11O14788 AL355001.2-201ENST00000620617 1191 ntBASIC19.89■□□□□ 0.77
TNFSF11O14788 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF11O14788 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF11O14788 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF11O14788 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF11O14788 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF11O14788 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TNFSF11O14788 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TNFSF11O14788 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF11O14788 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TNFSF11O14788 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF11O14788 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFSF11O14788 DUSP8P5-201ENST00000422884 1815 ntBASIC19.88■□□□□ 0.77
TNFSF11O14788 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF11O14788 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF11O14788 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFSF11O14788 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFSF11O14788 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF11O14788 AC142381.2-201ENST00000566120 298 ntBASIC19.87■□□□□ 0.77
TNFSF11O14788 AL031432.3-201ENST00000607698 485 ntBASIC19.87■□□□□ 0.77
TNFSF11O14788 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF11O14788 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF11O14788 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF11O14788 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TNFSF11O14788 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TNFSF11O14788 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.86■□□□□ 0.77
TNFSF11O14788 AP001330.3-201ENST00000520123 633 ntBASIC19.86■□□□□ 0.77
TNFSF11O14788 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF11O14788 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TNFSF11O14788 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF11O14788 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TNFSF11O14788 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFSF11O14788 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF11O14788 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF11O14788 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF11O14788 AF213884.3-201ENST00000563833 479 ntBASIC19.85■□□□□ 0.77
TNFSF11O14788 AC008764.7-201ENST00000593779 1081 ntBASIC19.85■□□□□ 0.77
TNFSF11O14788 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TNFSF11O14788 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TNFSF11O14788 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF11O14788 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF11O14788 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF11O14788 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.84■□□□□ 0.77
TNFSF11O14788 SLC47A1P1-202ENST00000449666 945 ntBASIC19.84■□□□□ 0.77
TNFSF11O14788 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TNFSF11O14788 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF11O14788 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF11O14788 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TNFSF11O14788 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF11O14788 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF11O14788 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TNFSF11O14788 SUDS3P1-201ENST00000505831 966 ntBASIC19.83■□□□□ 0.77
TNFSF11O14788 AC010525.1-201ENST00000585559 441 ntBASIC19.83■□□□□ 0.77
TNFSF11O14788 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.83■□□□□ 0.77
TNFSF11O14788 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.83■□□□□ 0.77
TNFSF11O14788 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF11O14788 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF11O14788 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
TNFSF11O14788 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms