Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC009086.3-201ENST00000623486 1008 ntBASIC21.12■□□□□ 0.97
RTCAO00442 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RTCAO00442 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
RTCAO00442 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RTCAO00442 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCAO00442 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
RTCAO00442 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RTCAO00442 AC012676.1-201ENST00000574705 1949 ntBASIC21.12■□□□□ 0.97
RTCAO00442 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCAO00442 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.11■□□□□ 0.97
RTCAO00442 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RTCAO00442 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.1■□□□□ 0.97
RTCAO00442 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTCAO00442 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.1■□□□□ 0.97
RTCAO00442 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCAO00442 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.09■□□□□ 0.97
RTCAO00442 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.09■□□□□ 0.97
RTCAO00442 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCAO00442 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTCAO00442 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RTCAO00442 AC004687.1-201ENST00000579003 1625 ntBASIC21.09■□□□□ 0.97
RTCAO00442 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RTCAO00442 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCAO00442 AC241377.3-202ENST00000626088 1088 ntBASIC21.09■□□□□ 0.97
RTCAO00442 AC241585.3-202ENST00000628937 1088 ntBASIC21.09■□□□□ 0.97
RTCAO00442 AC245100.8-202ENST00000629247 1058 ntBASIC21.09■□□□□ 0.97
RTCAO00442 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.09■□□□□ 0.97
RTCAO00442 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCAO00442 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RTCAO00442 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RTCAO00442 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
RTCAO00442 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCAO00442 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.08■□□□□ 0.97
RTCAO00442 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCAO00442 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTCAO00442 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTCAO00442 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.08■□□□□ 0.97
RTCAO00442 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
RTCAO00442 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.08■□□□□ 0.97
RTCAO00442 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.08■□□□□ 0.97
RTCAO00442 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.08■□□□□ 0.97
RTCAO00442 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTCAO00442 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
RTCAO00442 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTCAO00442 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTCAO00442 AL136116.3-201ENST00000402907 1138 ntBASIC21.07■□□□□ 0.96
RTCAO00442 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTCAO00442 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.07■□□□□ 0.96
RTCAO00442 pRNA.6-201ENST00000610482 90 ntBASIC21.07■□□□□ 0.96
RTCAO00442 pRNA.5-201ENST00000612139 90 ntBASIC21.07■□□□□ 0.96
RTCAO00442 pRNA.11-201ENST00000618423 90 ntBASIC21.07■□□□□ 0.96
RTCAO00442 pRNA.13-201ENST00000619112 90 ntBASIC21.07■□□□□ 0.96
RTCAO00442 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTCAO00442 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTCAO00442 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RTCAO00442 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RTCAO00442 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTCAO00442 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTCAO00442 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.05■□□□□ 0.96
RTCAO00442 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
RTCAO00442 AC233723.2-201ENST00000623798 2106 ntBASIC21.05■□□□□ 0.96
RTCAO00442 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.05■□□□□ 0.96
RTCAO00442 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTCAO00442 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.04■□□□□ 0.96
RTCAO00442 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.04■□□□□ 0.96
RTCAO00442 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTCAO00442 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms