Protein–RNA interactions for Protein: J3QRE1

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QRE1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
J3QRE1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.66■□□□□ 0.74
J3QRE1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
J3QRE1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
J3QRE1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
J3QRE1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
J3QRE1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.65■□□□□ 0.74
J3QRE1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.65■□□□□ 0.74
J3QRE1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
J3QRE1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
J3QRE1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.64■□□□□ 0.74
J3QRE1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
J3QRE1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
J3QRE1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.64■□□□□ 0.73
J3QRE1 HSD17B1P1-201ENST00000590052 955 ntBASIC19.64■□□□□ 0.73
J3QRE1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.64■□□□□ 0.73
J3QRE1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.64■□□□□ 0.73
J3QRE1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
J3QRE1 AC010542.4-201ENST00000563151 1910 ntBASIC19.64■□□□□ 0.73
J3QRE1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.64■□□□□ 0.73
J3QRE1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
J3QRE1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.63■□□□□ 0.73
J3QRE1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
J3QRE1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.63■□□□□ 0.73
J3QRE1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
J3QRE1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
J3QRE1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
J3QRE1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
J3QRE1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
J3QRE1 SNX5-217ENST00000606557 1087 ntBASIC19.63■□□□□ 0.73
J3QRE1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.63■□□□□ 0.73
J3QRE1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.63■□□□□ 0.73
J3QRE1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
J3QRE1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
J3QRE1 AC074183.2-201ENST00000623112 922 ntBASIC19.62■□□□□ 0.73
J3QRE1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
J3QRE1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
J3QRE1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
J3QRE1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
J3QRE1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.61■□□□□ 0.73
J3QRE1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.61■□□□□ 0.73
J3QRE1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.61■□□□□ 0.73
J3QRE1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
J3QRE1 FAM99A-202ENST00000538190 1989 ntBASIC19.61■□□□□ 0.73
J3QRE1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
J3QRE1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
J3QRE1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
J3QRE1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
J3QRE1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.6■□□□□ 0.73
J3QRE1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
J3QRE1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.6■□□□□ 0.73
J3QRE1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
J3QRE1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.6■□□□□ 0.73
J3QRE1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
J3QRE1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 LINC01529-204ENST00000636474 1715 ntBASIC19.59■□□□□ 0.73
J3QRE1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
J3QRE1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.59■□□□□ 0.73
J3QRE1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
J3QRE1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.59■□□□□ 0.73
J3QRE1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.59■□□□□ 0.73
J3QRE1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.59■□□□□ 0.73
J3QRE1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
J3QRE1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.59■□□□□ 0.73
J3QRE1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
J3QRE1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
J3QRE1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
J3QRE1 FP325331.1-202ENST00000623531 1380 ntBASIC19.58■□□□□ 0.73
J3QRE1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
J3QRE1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
J3QRE1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
J3QRE1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.58■□□□□ 0.73
J3QRE1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
J3QRE1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.58■□□□□ 0.72
J3QRE1 NTF6A-201ENST00000591175 560 ntBASIC19.58■□□□□ 0.72
J3QRE1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
J3QRE1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms