Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF223E7ERA6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF223E7ERA6 LINC01529-204ENST00000636474 1715 ntBASIC18.46■□□□□ 0.55
RNF223E7ERA6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF223E7ERA6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF223E7ERA6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF223E7ERA6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF223E7ERA6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF223E7ERA6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF223E7ERA6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF223E7ERA6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF223E7ERA6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF223E7ERA6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 RAP2CP1-201ENST00000605103 478 ntBASIC18.45■□□□□ 0.54
RNF223E7ERA6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF223E7ERA6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RNF223E7ERA6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.44■□□□□ 0.54
RNF223E7ERA6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 AC026185.1-201ENST00000445748 174 ntBASIC18.44■□□□□ 0.54
RNF223E7ERA6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF223E7ERA6 AC144652.1-201ENST00000609974 1624 ntBASIC18.44■□□□□ 0.54
RNF223E7ERA6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF223E7ERA6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF223E7ERA6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF223E7ERA6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF223E7ERA6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF223E7ERA6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF223E7ERA6 BID-214ENST00000617586 542 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF223E7ERA6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF223E7ERA6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF223E7ERA6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF223E7ERA6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF223E7ERA6 AC006970.2-201ENST00000450065 779 ntBASIC18.42■□□□□ 0.54
RNF223E7ERA6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF223E7ERA6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 TPRG1LP1-201ENST00000598702 760 ntBASIC18.42■□□□□ 0.54
RNF223E7ERA6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF223E7ERA6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF223E7ERA6 AC004854.2-201ENST00000608450 1441 ntBASIC18.41■□□□□ 0.54
RNF223E7ERA6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF223E7ERA6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.41■□□□□ 0.54
RNF223E7ERA6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 AC104771.1-201ENST00000603335 964 ntBASIC18.41■□□□□ 0.54
RNF223E7ERA6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF223E7ERA6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF223E7ERA6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF223E7ERA6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF223E7ERA6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 AP004607.4-201ENST00000530158 1459 ntBASIC18.4■□□□□ 0.54
RNF223E7ERA6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 AL355802.2-201ENST00000402069 882 ntBASIC18.4■□□□□ 0.54
RNF223E7ERA6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF223E7ERA6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF223E7ERA6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms