Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPB4C9JG80 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.66■□□□□ 0.74
NPIPB4C9JG80 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.65■□□□□ 0.74
NPIPB4C9JG80 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPIPB4C9JG80 LINC01960-201ENST00000563759 1884 ntBASIC19.65■□□□□ 0.74
NPIPB4C9JG80 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPIPB4C9JG80 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPIPB4C9JG80 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NPIPB4C9JG80 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 LINC00526-201ENST00000581067 1875 ntBASIC19.64■□□□□ 0.73
NPIPB4C9JG80 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPIPB4C9JG80 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 AC004687.1-201ENST00000579003 1625 ntBASIC19.63■□□□□ 0.73
NPIPB4C9JG80 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 AL356441.2-201ENST00000443009 864 ntBASIC19.63■□□□□ 0.73
NPIPB4C9JG80 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPIPB4C9JG80 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 AL512631.2-201ENST00000604634 923 ntBASIC19.62■□□□□ 0.73
NPIPB4C9JG80 AC092171.4-201ENST00000609130 632 ntBASIC19.62■□□□□ 0.73
NPIPB4C9JG80 CA15P2-201ENST00000611168 834 ntBASIC19.62■□□□□ 0.73
NPIPB4C9JG80 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPIPB4C9JG80 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NPIPB4C9JG80 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
NPIPB4C9JG80 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms