Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCA1A8K7I4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCA1A8K7I4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 AC007375.3-201ENST00000600936 2314 ntBASIC20.6■□□□□ 0.89
CLCA1A8K7I4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCA1A8K7I4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 MIR935-201ENST00000401179 91 ntBASIC20.59■□□□□ 0.89
CLCA1A8K7I4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLCA1A8K7I4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCA1A8K7I4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCA1A8K7I4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCA1A8K7I4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLCA1A8K7I4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CLCA1A8K7I4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.58■□□□□ 0.88
CLCA1A8K7I4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CLCA1A8K7I4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 AL022069.1-201ENST00000568025 1636 ntBASIC20.57■□□□□ 0.88
CLCA1A8K7I4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 AL136116.3-201ENST00000402907 1138 ntBASIC20.57■□□□□ 0.88
CLCA1A8K7I4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCA1A8K7I4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 AL161729.1-201ENST00000604104 1402 ntBASIC20.56■□□□□ 0.88
CLCA1A8K7I4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCA1A8K7I4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 AC242852.2-201ENST00000615738 1807 ntBASIC20.55■□□□□ 0.88
CLCA1A8K7I4 AL024507.2-201ENST00000606070 2574 ntBASIC20.55■□□□□ 0.88
CLCA1A8K7I4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCA1A8K7I4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCA1A8K7I4 AL512631.2-201ENST00000604634 923 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms