Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 AL117332.1-201ENST00000622628 974 ntBASIC20.22■□□□□ 0.83
ZC3H12DA2A288 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZC3H12DA2A288 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H12DA2A288 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.2■□□□□ 0.82
ZC3H12DA2A288 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H12DA2A288 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 MIR3621-201ENST00000580529 85 ntBASIC20.18■□□□□ 0.82
ZC3H12DA2A288 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H12DA2A288 C17orf82-201ENST00000623772 1530 ntBASIC20.17■□□□□ 0.82
ZC3H12DA2A288 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 AL356740.2-201ENST00000601559 647 ntBASIC20.17■□□□□ 0.82
ZC3H12DA2A288 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.17■□□□□ 0.82
ZC3H12DA2A288 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H12DA2A288 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H12DA2A288 LINC00526-201ENST00000581067 1875 ntBASIC20.16■□□□□ 0.82
ZC3H12DA2A288 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 LINC01529-204ENST00000636474 1715 ntBASIC20.15■□□□□ 0.82
ZC3H12DA2A288 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZC3H12DA2A288 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.14■□□□□ 0.82
ZC3H12DA2A288 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3H12DA2A288 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 FP325331.1-202ENST00000623531 1380 ntBASIC20.13■□□□□ 0.81
ZC3H12DA2A288 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H12DA2A288 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H12DA2A288 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms