Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV39A0A0B4J263 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV39A0A0B4J263 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV39A0A0B4J263 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV39A0A0B4J263 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV39A0A0B4J263 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 UNC93B8-201ENST00000511903 705 ntBASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV39A0A0B4J263 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 AC009102.2-201ENST00000606772 1639 ntBASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 LINC01529-204ENST00000636474 1715 ntBASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV39A0A0B4J263 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 CLDN5-201ENST00000403084 2357 ntBASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV39A0A0B4J263 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV39A0A0B4J263 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 AL035685.1-201ENST00000636663 812 ntBASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV39A0A0B4J263 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV39A0A0B4J263 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 LINC00565-201ENST00000562710 2331 ntBASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV39A0A0B4J263 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms