Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 AL157400.5-201ENST00000507624 621 ntBASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 LINC01521-201ENST00000504184 1943 ntBASIC15.55■□□□□ 0.08
TRAV12-1A0A0B4J245 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV12-1A0A0B4J245 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV12-1A0A0B4J245 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 SMPD5-203ENST00000639008 1464 ntBASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV12-1A0A0B4J245 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TRAV12-1A0A0B4J245 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 AC087742.1-201ENST00000575880 1738 ntBASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV12-1A0A0B4J245 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 AC244015.2-201ENST00000616358 1861 ntBASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV12-1A0A0B4J245 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms