Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV13-2A0A0B4J235 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV13-2A0A0B4J235 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV13-2A0A0B4J235 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV13-2A0A0B4J235 AC073130.3-201ENST00000624389 2278 ntBASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV13-2A0A0B4J235 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-2A0A0B4J235 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 AC025884.2-201ENST00000553429 711 ntBASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-2A0A0B4J235 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms