Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RN7SL684P-201ENST00000465665 294 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AC147876.1-201ENST00000504408 322 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AC023051.2-201ENST00000541141 460 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 RN7SL162P-201ENST00000579233 292 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 DGAT2L7P-201ENST00000602462 744 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PCDHB19P-202ENST00000625133 2914 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 LINC00567-201ENST00000569854 3409 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 RN7SL524P-201ENST00000581152 300 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC016582.2-202ENST00000587765 1094 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC020904.3-201ENST00000624199 442 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC012183.1-201ENST00000625197 499 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 Z82244.1-201ENST00000631502 840 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC012358.2-201ENST00000430010 1434 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AC011477.7-201ENST00000617163 1440 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 GBAP1-208ENST00000566701 1546 ntBASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.05□□□□□ -0.16
SHKBP1Q8TBC3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHKBP1Q8TBC3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms