Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 NBPF13P-201ENST00000444082 1783 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 OR10N1P-203ENST00000641736 1305 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC020629.1-201ENST00000550858 1650 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 PLP2-201ENST00000376322 620 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RRM2P2-201ENST00000436212 652 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC005252.3-201ENST00000623855 2258 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AC022748.2-203ENST00000564933 1432 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 KLK8-201ENST00000291726 853 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SNRPCP5-201ENST00000531775 189 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AC068987.2-201ENST00000565518 896 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 WASH2P-201ENST00000453662 1684 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AFG3L2P1-201ENST00000521792 1763 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 RN7SL229P-201ENST00000495651 299 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 MIR4725-201ENST00000581700 90 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 UROD-221ENST00000636293 1102 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 EIF3LP1-201ENST00000554099 1658 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 MED8-201ENST00000290663 1483 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CALN1-205ENST00000431984 777 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 MIR6750-201ENST00000617817 75 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AP003062.2-201ENST00000624288 1117 ntBASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 PGAP2-235ENST00000532523 1696 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
VPS13DQ5THJ4 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms