Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.75□□□□□ -0.37
SCN2BO60939 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.75□□□□□ -0.37
SCN2BO60939 AC079250.1-201ENST00000456046 531 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 RPL18AP3-201ENST00000462885 528 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.75□□□□□ -0.37
SCN2BO60939 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.75□□□□□ -0.37
SCN2BO60939 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.75□□□□□ -0.37
SCN2BO60939 AC007718.1-201ENST00000621078 280 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 Z97653.2-201ENST00000623057 1418 ntBASIC12.75□□□□□ -0.37
SCN2BO60939 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.75□□□□□ -0.37
SCN2BO60939 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SCN2BO60939 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
SCN2BO60939 AC008806.1-201ENST00000624962 2443 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 TBC1D3J-201ENST00000620719 1426 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 KRT8P42-201ENST00000405771 1399 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.74□□□□□ -0.37
SCN2BO60939 TPI1P3-201ENST00000335020 740 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.74□□□□□ -0.37
SCN2BO60939 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC073210.1-201ENST00000414799 232 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.74□□□□□ -0.37
SCN2BO60939 ERP29P1-201ENST00000442902 706 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 Z97180.1-201ENST00000445173 988 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.74□□□□□ -0.37
SCN2BO60939 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.74□□□□□ -0.37
SCN2BO60939 NUP210P1-202ENST00000504322 710 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.74□□□□□ -0.37
SCN2BO60939 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.74□□□□□ -0.37
SCN2BO60939 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 MIR2392-201ENST00000584881 84 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC026304.1-201ENST00000597953 561 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 MIR8071-1-201ENST00000616769 65 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 MIR8071-2-201ENST00000616772 65 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 AP001505.2-201ENST00000616815 443 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 MIR6799-201ENST00000620297 69 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 CTAGE13P-201ENST00000416709 2446 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 AC124319.4-201ENST00000622931 2161 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SCN2BO60939 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 PABPC1P2-201ENST00000471997 1805 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.74□□□□□ -0.37
SCN2BO60939 AC135506.1-201ENST00000603877 1799 ntBASIC12.74□□□□□ -0.37
SCN2BO60939 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SCN2BO60939 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms