Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM6Q9C030 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM6Q9C030 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM6Q9C030 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM6Q9C030 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM6Q9C030 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AOC4P-203ENST00000566825 2289 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 LINC00638-201ENST00000555578 2518 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AC103563.1-201ENST00000429316 123 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 KRT17P4-201ENST00000429445 819 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 FAM86B3P-203ENST00000523992 854 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AP005212.2-201ENST00000584979 510 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 AC026120.2-201ENST00000617239 309 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.86□□□□□ -0.03
TRIM6Q9C030 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM6Q9C030 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM6Q9C030 AL358781.1-202ENST00000321081 1360 ntBASIC14.85□□□□□ -0.03
TRIM6Q9C030 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AC023794.5-201ENST00000564380 2157 ntBASIC14.85□□□□□ -0.03
TRIM6Q9C030 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AC005014.1-201ENST00000432006 2976 ntBASIC14.85□□□□□ -0.03
TRIM6Q9C030 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM6Q9C030 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM6Q9C030 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms