Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ATRXP46100 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ATRXP46100 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ATRXP46100 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC12.11□□□□□ -0.47
ATRXP46100 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC12.11□□□□□ -0.47
ATRXP46100 AC010997.1-201ENST00000447646 350 ntBASIC12.11□□□□□ -0.47
ATRXP46100 AC136475.6-201ENST00000533113 289 ntBASIC12.11□□□□□ -0.47
ATRXP46100 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 MIR4294-201ENST00000584548 76 ntBASIC12.11□□□□□ -0.47
ATRXP46100 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC12.11□□□□□ -0.47
ATRXP46100 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 LINC00552-201ENST00000625151 2579 ntBASIC12.11□□□□□ -0.47
ATRXP46100 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.11□□□□□ -0.47
ATRXP46100 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
ATRXP46100 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC12.11□□□□□ -0.47
ATRXP46100 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ATRXP46100 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 HSPA7-201ENST00000445535 1927 ntBASIC12.1□□□□□ -0.47
ATRXP46100 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ATRXP46100 AC024475.2-201ENST00000312173 879 ntBASIC12.1□□□□□ -0.47
ATRXP46100 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 AKR1B1P7-201ENST00000587229 952 ntBASIC12.1□□□□□ -0.47
ATRXP46100 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 AL132656.1-201ENST00000452173 490 ntBASIC12.1□□□□□ -0.47
ATRXP46100 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC12.1□□□□□ -0.47
ATRXP46100 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC12.1□□□□□ -0.47
ATRXP46100 AL606834.1-201ENST00000553836 1169 ntBASIC12.1□□□□□ -0.47
ATRXP46100 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC12.1□□□□□ -0.47
ATRXP46100 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC12.1□□□□□ -0.47
ATRXP46100 RN7SK-201ENST00000636484 328 ntBASIC12.1□□□□□ -0.47
ATRXP46100 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC12.1□□□□□ -0.47
ATRXP46100 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
ATRXP46100 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ATRXP46100 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.09□□□□□ -0.47
ATRXP46100 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.09□□□□□ -0.47
ATRXP46100 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.09□□□□□ -0.47
ATRXP46100 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ATRXP46100 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC12.09□□□□□ -0.47
ATRXP46100 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC12.09□□□□□ -0.47
ATRXP46100 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ATRXP46100 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC12.09□□□□□ -0.47
ATRXP46100 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
ATRXP46100 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC12.09□□□□□ -0.47
ATRXP46100 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC12.09□□□□□ -0.47
ATRXP46100 SARS2-211ENST00000598831 665 ntTSL 5 BASIC12.09□□□□□ -0.47
ATRXP46100 AC025165.4-201ENST00000602327 433 ntBASIC12.09□□□□□ -0.47
ATRXP46100 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC12.09□□□□□ -0.47
ATRXP46100 AC117500.5-201ENST00000623233 527 ntBASIC12.09□□□□□ -0.47
ATRXP46100 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ATRXP46100 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.09□□□□□ -0.47
ATRXP46100 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms