Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.04□□□□□ -0.16
MTHFRP42898 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
MTHFRP42898 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MTHFRP42898 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.04□□□□□ -0.16
MTHFRP42898 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 SNORD23-201ENST00000408876 110 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 GAPDHP29-201ENST00000429913 985 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AKR1C6P-201ENST00000432950 983 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.03□□□□□ -0.16
MTHFRP42898 AK2P2-201ENST00000439142 405 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 DUX4L31-201ENST00000446466 1136 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.03□□□□□ -0.16
MTHFRP42898 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14.03□□□□□ -0.16
MTHFRP42898 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
MTHFRP42898 AL031768.1-201ENST00000606542 701 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC117500.5-201ENST00000623233 527 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.03□□□□□ -0.16
MTHFRP42898 AC034205.3-201ENST00000603595 1376 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.03□□□□□ -0.16
MTHFRP42898 DLX4-206ENST00000611342 1662 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 AL031590.1-202ENST00000641466 1737 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 CICP16-201ENST00000502609 2813 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 AC005562.1-201ENST00000583030 3219 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MTHFRP42898 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 AL031595.1-201ENST00000623969 4709 ntBASIC14.03□□□□□ -0.16
MTHFRP42898 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
MTHFRP42898 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
MTHFRP42898 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.02□□□□□ -0.16
MTHFRP42898 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MTHFRP42898 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
MTHFRP42898 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
MTHFRP42898 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.02□□□□□ -0.16
MTHFRP42898 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MTHFRP42898 TCAM1P-207ENST00000485295 1537 ntBASIC14.02□□□□□ -0.16
MTHFRP42898 AC015813.5-201ENST00000624641 1514 ntBASIC14.02□□□□□ -0.16
MTHFRP42898 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms