Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.04□□□□□ -0.48
ZIC3O60481 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.04□□□□□ -0.48
ZIC3O60481 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 AP005212.2-201ENST00000584979 510 ntBASIC12.04□□□□□ -0.48
ZIC3O60481 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 AL137784.3-201ENST00000623858 2288 ntBASIC12.04□□□□□ -0.48
ZIC3O60481 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.04□□□□□ -0.48
ZIC3O60481 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ZIC3O60481 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZIC3O60481 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZIC3O60481 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC12.04□□□□□ -0.48
ZIC3O60481 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.03□□□□□ -0.48
ZIC3O60481 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 AC139491.6-202ENST00000637171 2077 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ZIC3O60481 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 GGT8P-201ENST00000418938 532 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 BCL2L12P1-201ENST00000508390 733 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC12.03□□□□□ -0.48
ZIC3O60481 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.03□□□□□ -0.48
ZIC3O60481 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC12.03□□□□□ -0.48
ZIC3O60481 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 METTL23-211ENST00000589977 617 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 AC010531.8-201ENST00000623341 685 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.03□□□□□ -0.48
ZIC3O60481 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 AC073862.3-201ENST00000624597 1648 ntBASIC12.03□□□□□ -0.48
ZIC3O60481 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZIC3O60481 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.03□□□□□ -0.48
ZIC3O60481 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms