Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AP000920.1-201ENST00000531824 344 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 BAK1P2-201ENST00000532665 631 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AL359219.1-201ENST00000556311 934 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 ACTBP9-201ENST00000587663 1099 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 METTL23-211ENST00000589977 617 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 AC244154.1-201ENST00000620148 1555 ntBASIC11.84□□□□□ -0.51
NPIPB4C9JG80 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NPIPB4C9JG80 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
NPIPB4C9JG80 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC11.83□□□□□ -0.51
NPIPB4C9JG80 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
NPIPB4C9JG80 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
NPIPB4C9JG80 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 RN7SKP255-201ENST00000363442 313 ntBASIC11.83□□□□□ -0.52
NPIPB4C9JG80 RN7SKP203-201ENST00000363618 332 ntBASIC11.83□□□□□ -0.52
NPIPB4C9JG80 RN7SKP71-201ENST00000364558 318 ntBASIC11.83□□□□□ -0.52
NPIPB4C9JG80 7SK.1-201ENST00000365328 331 ntBASIC11.83□□□□□ -0.52
NPIPB4C9JG80 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC11.83□□□□□ -0.52
NPIPB4C9JG80 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms