Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EEF1GP3-201ENST00000421044 1288 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 RBPMSLP-201ENST00000433427 502 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 C2orf27AP2-201ENST00000438438 555 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 RPL30-213ENST00000523172 274 ntTSL 5 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AC106774.4-201ENST00000600799 409 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 MIR941-1-201ENST00000636396 72 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 AC063926.3-201ENST00000624734 5658 ntBASIC16.49■□□□□ 0.23
RC3H1Q5TC82 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 GDA-203ENST00000376986 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
RC3H1Q5TC82 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 LINC02228-204ENST00000642115 2962 ntBASIC16.48■□□□□ 0.23
RC3H1Q5TC82 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC009474.1-201ENST00000455096 1565 ntBASIC16.48■□□□□ 0.23
RC3H1Q5TC82 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 IL6RP1-201ENST00000417848 1273 ntBASIC16.48■□□□□ 0.23
RC3H1Q5TC82 MTND6P7-201ENST00000433237 524 ntBASIC16.48■□□□□ 0.23
RC3H1Q5TC82 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AC023794.5-201ENST00000564380 2157 ntBASIC16.48■□□□□ 0.23
RC3H1Q5TC82 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RC3H1Q5TC82 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 HNRNPA1P19-201ENST00000405292 370 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AL357054.1-201ENST00000407035 1227 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AL356583.3-201ENST00000412354 417 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CYP4F60P-201ENST00000439449 549 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AC110753.1-201ENST00000505711 1022 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 AC009238.3-201ENST00000512705 217 ntBASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC16.47■□□□□ 0.23
RC3H1Q5TC82 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms