Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.58□□□□□ -0.23
KDELR3O43731 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
KDELR3O43731 MKRN7P-201ENST00000433469 1371 ntBASIC13.58□□□□□ -0.23
KDELR3O43731 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
KDELR3O43731 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC13.58□□□□□ -0.23
KDELR3O43731 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
KDELR3O43731 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 DGCR9-201ENST00000609630 2415 ntBASIC13.58□□□□□ -0.24
KDELR3O43731 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
KDELR3O43731 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
KDELR3O43731 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 SSR4P1-201ENST00000415143 412 ntBASIC13.58□□□□□ -0.24
KDELR3O43731 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
KDELR3O43731 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
KDELR3O43731 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.58□□□□□ -0.24
KDELR3O43731 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.58□□□□□ -0.24
KDELR3O43731 RN7SL605P-201ENST00000577229 281 ntBASIC13.58□□□□□ -0.24
KDELR3O43731 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.58□□□□□ -0.24
KDELR3O43731 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.58□□□□□ -0.24
KDELR3O43731 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.58□□□□□ -0.24
KDELR3O43731 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 AC104590.1-202ENST00000558368 1921 ntBASIC13.58□□□□□ -0.24
KDELR3O43731 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
KDELR3O43731 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KDELR3O43731 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 MIR324-201ENST00000362183 83 ntBASIC13.57□□□□□ -0.24
KDELR3O43731 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
KDELR3O43731 GGT8P-201ENST00000418938 532 ntBASIC13.57□□□□□ -0.24
KDELR3O43731 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 ZNF877P-201ENST00000437614 612 ntBASIC13.57□□□□□ -0.24
KDELR3O43731 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 AC063952.3-201ENST00000467756 308 ntBASIC13.57□□□□□ -0.24
KDELR3O43731 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.57□□□□□ -0.24
KDELR3O43731 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.57□□□□□ -0.24
KDELR3O43731 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KDELR3O43731 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC13.57□□□□□ -0.24
KDELR3O43731 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.57□□□□□ -0.24
KDELR3O43731 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
KDELR3O43731 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
KDELR3O43731 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.56□□□□□ -0.24
KDELR3O43731 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms