Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 TEKT4P2-202ENST00000559466 1312 ntBASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 FAM90A11P-201ENST00000518378 2218 ntBASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ISCA2P1-201ENST00000425548 448 ntBASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF6Q9Y4K3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 BRWD1P1-201ENST00000401091 371 ntBASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL109837.1-201ENST00000603272 613 ntBASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL118558.3-201ENST00000607414 1079 ntBASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL022328.3-201ENST00000607943 679 ntBASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AC092171.5-201ENST00000608012 942 ntBASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAF6Q9Y4K3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms