Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 AL359183.1-201ENST00000623796 2132 ntBASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20BQ9P0W2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AC083801.1-201ENST00000491689 358 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 KNOP1P1-201ENST00000542108 989 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 MIR5091-201ENST00000578707 93 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 AP001120.3-201ENST00000585729 489 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 ZSCAN5DP-201ENST00000600684 1488 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 PPP1R26P2-201ENST00000611403 3595 ntBASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20BQ9P0W2 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SRL-202ENST00000537996 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AC034205.3-201ENST00000603595 1376 ntBASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 PHBP18-201ENST00000546648 813 ntBASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AL118516.1-201ENST00000564152 670 ntBASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 GGNBP1-204ENST00000613113 887 ntBASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.31■□□□□ 0.2
HMG20BQ9P0W2 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms