Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AC106818.1-201ENST00000623223 3242 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 LINC00638-201ENST00000555578 2518 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 RPSAP31-201ENST00000416648 895 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 RPL35P9-201ENST00000446059 350 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC226150.1-201ENST00000544259 466 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC132812.1-201ENST00000583145 892 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC011491.1-203ENST00000637688 543 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 AC108024.1-201ENST00000626286 1721 ntBASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.16□□□□□ -0.46
PARPBPQ9NWS1 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 MSNP1-201ENST00000511640 1732 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 AC018463.1-201ENST00000456674 917 ntBASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.15□□□□□ -0.46
PARPBPQ9NWS1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms