Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC127537.3-201ENST00000566532 749 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RN7SL733P-201ENST00000582253 329 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RN7SL248P-201ENST00000615117 329 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 RN7SL453P-201ENST00000620275 329 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 AC093323.3-201ENST00000632627 949 ntBASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS13DQ5THJ4 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AL354714.2-201ENST00000425270 1097 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FP236383.2-201ENST00000625598 923 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FP236383.3-201ENST00000627981 923 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FP671120.3-201ENST00000631211 923 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 RPSAP19-201ENST00000431241 880 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 YBX1P9-201ENST00000441264 679 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PTS-204ENST00000525803 625 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AP001505.1-201ENST00000569966 824 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 LDHAL6FP-201ENST00000405916 1082 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 DEFA8P-201ENST00000457582 285 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 CDK2AP2P2-201ENST00000478512 367 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 DPPA5P4-201ENST00000559021 365 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC015936.1-201ENST00000591013 1028 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC092471.2-201ENST00000637219 651 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SNORA80B-201ENST00000383906 136 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AC145285.1-201ENST00000469929 694 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 AP001775.1-201ENST00000532608 586 ntBASIC8.57□□□□□ -1.04
VPS13DQ5THJ4 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms