Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 VENTXP3-201ENST00000546480 773 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
CLDN20P56880 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDN20P56880 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 SNORA50.1-201ENST00000628590 135 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 AC124319.4-201ENST00000622931 2161 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 Z98885.3-201ENST00000624882 1757 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 RCC2P5-201ENST00000492126 1487 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 AC106827.1-201ENST00000366454 431 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 MIR3940-201ENST00000579148 102 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 MIR7845-201ENST00000618396 99 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CLDN20P56880 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CLDN20P56880 AC245140.2-201ENST00000624054 1939 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 AC022364.1-202ENST00000617468 2409 ntBASIC12.42□□□□□ -0.42
CLDN20P56880 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CLDN20P56880 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CLDN20P56880 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDN20P56880 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CLDN20P56880 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CLDN20P56880 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.41□□□□□ -0.42
CLDN20P56880 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms