Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDE6BP35913 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDE6BP35913 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 HNRNPA1P33-201ENST00000421426 561 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC114781.1-201ENST00000450559 1028 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC16.36■□□□□ 0.21
PDE6BP35913 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC026304.1-201ENST00000597953 561 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDE6BP35913 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 AL358781.1-202ENST00000321081 1360 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDE6BP35913 TP73-201ENST00000346387 4854 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC16.36■□□□□ 0.21
PDE6BP35913 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 AC007191.1-201ENST00000623179 2995 ntBASIC16.35■□□□□ 0.21
PDE6BP35913 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
PDE6BP35913 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 RPS6-201ENST00000315377 863 ntTSL 3 BASIC16.35■□□□□ 0.21
PDE6BP35913 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC16.35■□□□□ 0.21
PDE6BP35913 RN7SL76P-201ENST00000482435 289 ntBASIC16.35■□□□□ 0.21
PDE6BP35913 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 AL606834.1-201ENST00000553836 1169 ntBASIC16.35■□□□□ 0.21
PDE6BP35913 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
PDE6BP35913 AL033381.2-201ENST00000603854 732 ntBASIC16.35■□□□□ 0.21
PDE6BP35913 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PDE6BP35913 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDE6BP35913 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDE6BP35913 CDC20P1-201ENST00000488829 1500 ntBASIC16.35■□□□□ 0.21
PDE6BP35913 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 AC026748.1-201ENST00000624349 3251 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC16.34■□□□□ 0.21
PDE6BP35913 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms