Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.17■□□□□ 0.02
TPM3P06753 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.17■□□□□ 0.02
TPM3P06753 BX284668.4-201ENST00000453917 508 ntBASIC15.17■□□□□ 0.02
TPM3P06753 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.17■□□□□ 0.02
TPM3P06753 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.17■□□□□ 0.02
TPM3P06753 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.17■□□□□ 0.02
TPM3P06753 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.17■□□□□ 0.02
TPM3P06753 AL136295.7-201ENST00000619226 1200 ntBASIC15.17■□□□□ 0.02
TPM3P06753 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TPM3P06753 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TPM3P06753 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TPM3P06753 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TPM3P06753 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.16■□□□□ 0.02
TPM3P06753 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC15.16■□□□□ 0.02
TPM3P06753 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 AC009108.4-201ENST00000623284 2451 ntBASIC15.16■□□□□ 0.02
TPM3P06753 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TPM3P06753 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.16■□□□□ 0.02
TPM3P06753 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.16■□□□□ 0.02
TPM3P06753 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TPM3P06753 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 AL357140.3-201ENST00000639753 1983 ntBASIC15.16■□□□□ 0.02
TPM3P06753 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TPM3P06753 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TPM3P06753 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TPM3P06753 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.15■□□□□ 0.02
TPM3P06753 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 PKP4P1-201ENST00000426801 2158 ntBASIC15.15■□□□□ 0.02
TPM3P06753 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TPM3P06753 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 AC005154.3-201ENST00000419639 1393 ntBASIC15.15■□□□□ 0.02
TPM3P06753 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TPM3P06753 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.15■□□□□ 0.02
TPM3P06753 AC005722.1-201ENST00000431878 964 ntBASIC15.15■□□□□ 0.02
TPM3P06753 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.15■□□□□ 0.02
TPM3P06753 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.15■□□□□ 0.02
TPM3P06753 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TPM3P06753 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms