Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 PCDHB17P-202ENST00000623466 3066 ntBASIC12.8□□□□□ -0.36
SCN2BO60939 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 GPAA1P2-201ENST00000417923 928 ntBASIC12.8□□□□□ -0.36
SCN2BO60939 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 PRSS3P1-201ENST00000503996 742 ntBASIC12.8□□□□□ -0.36
SCN2BO60939 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.8□□□□□ -0.36
SCN2BO60939 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.8□□□□□ -0.36
SCN2BO60939 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.8□□□□□ -0.36
SCN2BO60939 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.8□□□□□ -0.36
SCN2BO60939 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.8□□□□□ -0.36
SCN2BO60939 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.8□□□□□ -0.36
SCN2BO60939 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCN2BO60939 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SCN2BO60939 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 AC011700.1-201ENST00000610409 2627 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 PYY2-201ENST00000315776 282 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 AC007274.1-201ENST00000439805 662 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 RN7SL11P-201ENST00000471305 293 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 NDUFS6P1-201ENST00000485187 316 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.79□□□□□ -0.36
SCN2BO60939 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.79□□□□□ -0.36
SCN2BO60939 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCN2BO60939 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
SCN2BO60939 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.79□□□□□ -0.36
SCN2BO60939 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.79□□□□□ -0.36
SCN2BO60939 MIR4687-201ENST00000583618 80 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 AP001462.1-201ENST00000594089 452 ntBASIC12.79□□□□□ -0.36
SCN2BO60939 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.79□□□□□ -0.36
SCN2BO60939 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SCN2BO60939 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms