Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 GUCY2EP-203ENST00000531117 1918 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ACTG1P19-201ENST00000418987 1116 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC069218.1-201ENST00000435269 762 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC005077.3-201ENST00000449614 213 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC079250.1-201ENST00000456046 531 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 RN7SL190P-201ENST00000582519 257 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 AP001972.5-201ENST00000624624 2338 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 BEND3P3-201ENST00000611030 2440 ntBASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR33B-201ENST00000385104 96 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AC041040.1-201ENST00000425197 460 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 EEF1GP8-201ENST00000506566 1154 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR3147-201ENST00000577811 66 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR6842-201ENST00000612539 65 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR8071-1-201ENST00000616769 65 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 MIR8071-2-201ENST00000616772 65 ntBASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PARPBPQ9NWS1 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms