Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ELK2AP-201ENST00000392510 1007 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ISCA2P1-201ENST00000425548 448 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AL596276.2-201ENST00000447525 331 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 RPSAP15-201ENST00000448168 861 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC145285.5-201ENST00000562217 361 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC020914.3-201ENST00000594712 304 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC243960.2-201ENST00000600996 747 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AC099521.2-201ENST00000619354 2036 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 IL9RP3-201ENST00000442856 1674 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 KRT18P9-201ENST00000604826 1300 ntBASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC50Q8IVM0 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AL021155.1-201ENST00000438808 2637 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AC098934.1-203ENST00000442868 1262 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AC091804.1-201ENST00000486888 567 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 MIR4326-201ENST00000582203 59 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 AL845472.1-202ENST00000624675 4080 ntBASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC50Q8IVM0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 AC124319.4-201ENST00000622931 2161 ntBASIC14.33□□□□□ -0.11
CCDC50Q8IVM0 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 LINC00265-2P-201ENST00000413372 782 ntBASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC50Q8IVM0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms