Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 FAM86FP-201ENST00000338711 969 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 ACTG1P10-201ENST00000428275 1082 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AC006987.4-201ENST00000430032 279 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AC098591.1-202ENST00000507914 937 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 SIGLEC21P-201ENST00000598990 1010 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AC239600.1-201ENST00000603201 462 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 AL662907.1-201ENST00000622988 1360 ntBASIC19.49■□□□□ 0.71
CDC42BPAQ5VT25 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 EEF1GP3-201ENST00000421044 1288 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 OARD1-214ENST00000486443 764 ntTSL 3 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 MIR4296-201ENST00000581038 88 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AC025165.4-201ENST00000602327 433 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AC013472.3-201ENST00000607407 659 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 MIR219A2-202ENST00000385220 97 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 HNRNPA1P59-201ENST00000430583 918 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 AC092471.1-202ENST00000637160 999 ntBASIC19.48■□□□□ 0.71
CDC42BPAQ5VT25 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 RBM14-203ENST00000409372 876 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 AC090093.1-201ENST00000611315 271 ntBASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42BPAQ5VT25 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 SNORA52-201ENST00000362915 134 ntBASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 MPI-212ENST00000565576 1148 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms