Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN20P56880 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLDN20P56880 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLDN20P56880 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN20P56880 AC092638.2-201ENST00000441105 947 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 AC004837.1-201ENST00000446267 564 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 AC018463.1-201ENST00000456674 917 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 AC025186.1-201ENST00000478174 870 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 EEF1GP8-201ENST00000506566 1154 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 AC100858.1-201ENST00000514059 1228 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN20P56880 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 AP003398.1-201ENST00000531124 318 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN20P56880 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 MIR6858-201ENST00000620733 67 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 AF013593.1-201ENST00000458074 1487 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 AC025183.3-201ENST00000623526 1482 ntBASIC12.44□□□□□ -0.42
CLDN20P56880 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN20P56880 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN20P56880 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN20P56880 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 AC090502.4-201ENST00000551714 1386 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.43□□□□□ -0.42
CLDN20P56880 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CLDN20P56880 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN20P56880 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.43□□□□□ -0.42
CLDN20P56880 DKKL1P1-201ENST00000400550 698 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 GGTLC4P-201ENST00000402176 664 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 SNORA50C-201ENST00000408535 133 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN20P56880 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.43□□□□□ -0.42
CLDN20P56880 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDN20P56880 AC104784.1-201ENST00000473096 294 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 AC093300.1-201ENST00000510368 1201 ntBASIC12.43□□□□□ -0.42
CLDN20P56880 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN20P56880 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms