Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLK1P49759 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 MIR769-201ENST00000390225 118 ntBASIC12.82□□□□□ -0.36
CLK1P49759 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.82□□□□□ -0.36
CLK1P49759 DUX4L50-201ENST00000455245 715 ntBASIC12.82□□□□□ -0.36
CLK1P49759 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.82□□□□□ -0.36
CLK1P49759 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.82□□□□□ -0.36
CLK1P49759 AC091544.8-201ENST00000619490 361 ntBASIC12.82□□□□□ -0.36
CLK1P49759 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLK1P49759 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 AC061965.1-201ENST00000560524 1465 ntBASIC12.82□□□□□ -0.36
CLK1P49759 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.82□□□□□ -0.36
CLK1P49759 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 AC124319.4-201ENST00000622931 2161 ntBASIC12.81□□□□□ -0.36
CLK1P49759 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.81□□□□□ -0.36
CLK1P49759 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 RCC2P1-201ENST00000452257 1476 ntBASIC12.81□□□□□ -0.36
CLK1P49759 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.81□□□□□ -0.36
CLK1P49759 RNA5SP359-201ENST00000364838 113 ntBASIC12.81□□□□□ -0.36
CLK1P49759 AC006987.1-201ENST00000413610 527 ntBASIC12.81□□□□□ -0.36
CLK1P49759 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 FNTAP2-201ENST00000430308 634 ntBASIC12.81□□□□□ -0.36
CLK1P49759 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.81□□□□□ -0.36
CLK1P49759 RN7SL277P-201ENST00000481521 288 ntBASIC12.81□□□□□ -0.36
CLK1P49759 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CLK1P49759 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 RN7SL774P-201ENST00000577467 290 ntBASIC12.81□□□□□ -0.36
CLK1P49759 MIR4525-201ENST00000580000 75 ntBASIC12.81□□□□□ -0.36
CLK1P49759 AC103810.3-201ENST00000583567 96 ntBASIC12.81□□□□□ -0.36
CLK1P49759 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
CLK1P49759 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLK1P49759 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CLK1P49759 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.81□□□□□ -0.36
CLK1P49759 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLK1P49759 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CLK1P49759 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms