Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 GUSBP10-201ENST00000417412 665 ntBASIC14.12□□□□□ -0.15
SLC1A1P43005 KRT18P62-201ENST00000446618 1287 ntBASIC14.12□□□□□ -0.15
SLC1A1P43005 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.12□□□□□ -0.15
SLC1A1P43005 ORAOV1P1-201ENST00000503108 395 ntBASIC14.12□□□□□ -0.15
SLC1A1P43005 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
SLC1A1P43005 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 AC007718.1-201ENST00000621078 280 ntBASIC14.12□□□□□ -0.15
SLC1A1P43005 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A1P43005 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A1P43005 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A1P43005 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A1P43005 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SLC1A1P43005 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLC1A1P43005 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 RNVU1-8-201ENST00000364272 125 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SLC1A1P43005 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A1P43005 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AL133466.1-201ENST00000447582 150 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 RN7SL375P-201ENST00000492442 298 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A1P43005 AC100858.1-201ENST00000514059 1228 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SLC1A1P43005 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 ACTG1P17-201ENST00000558391 1119 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 MIR4522-201ENST00000584932 87 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 AC026120.2-201ENST00000617239 309 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AL645937.6-201ENST00000641122 3727 ntBASIC14.11□□□□□ -0.15
SLC1A1P43005 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A1P43005 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AC135506.1-201ENST00000603877 1799 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms