Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.39■□□□□ 0.21
PDE6BP35913 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PDE6BP35913 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 AC023908.3-201ENST00000564211 3047 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PDE6BP35913 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 CR383656.2-201ENST00000548656 2254 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.38■□□□□ 0.21
PDE6BP35913 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC16.38■□□□□ 0.21
PDE6BP35913 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 AC139143.1-201ENST00000441772 1207 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 RN7SL477P-201ENST00000488440 286 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 AADAC-202ENST00000488869 719 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 KRT18P63-201ENST00000505463 979 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
PDE6BP35913 PEBP1P1-201ENST00000554856 510 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 AL139317.2-201ENST00000556998 158 ntBASIC16.38■□□□□ 0.21
PDE6BP35913 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC16.38■□□□□ 0.21
PDE6BP35913 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC16.38■□□□□ 0.21
PDE6BP35913 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PDE6BP35913 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDE6BP35913 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDE6BP35913 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.38■□□□□ 0.21
PDE6BP35913 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDE6BP35913 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.38■□□□□ 0.21
PDE6BP35913 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDE6BP35913 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.37■□□□□ 0.21
PDE6BP35913 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDE6BP35913 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PDE6BP35913 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 ZNF493-208ENST00000599461 1769 ntBASIC16.37■□□□□ 0.21
PDE6BP35913 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC16.37■□□□□ 0.21
PDE6BP35913 AC116347.1-201ENST00000442824 720 ntBASIC16.37■□□□□ 0.21
PDE6BP35913 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC16.37■□□□□ 0.21
PDE6BP35913 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC16.37■□□□□ 0.21
PDE6BP35913 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 RN7SL827P-201ENST00000607480 288 ntBASIC16.37■□□□□ 0.21
PDE6BP35913 AC009118.3-201ENST00000622896 873 ntBASIC16.37■□□□□ 0.21
PDE6BP35913 RPS9-213ENST00000626547 476 ntTSL 2 BASIC16.37■□□□□ 0.21
PDE6BP35913 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.37■□□□□ 0.21
PDE6BP35913 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDE6BP35913 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.37■□□□□ 0.21
PDE6BP35913 AC067750.1-201ENST00000608826 6545 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.36■□□□□ 0.21
PDE6BP35913 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDE6BP35913 AL365181.3-201ENST00000605886 3222 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 AC135506.1-201ENST00000603877 1799 ntBASIC16.36■□□□□ 0.21
PDE6BP35913 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDE6BP35913 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms