Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC135782.3-201ENST00000562782 2105 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AL445209.1-201ENST00000607269 3491 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 AC117503.4-201ENST00000623229 1418 ntBASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PARPBPQ9NWS1 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC006529.1-201ENST00000459978 637 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 IGHV1-12-201ENST00000518307 205 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 CR383656.3-201ENST00000551315 183 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 YRDCP1-201ENST00000621419 643 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC005014.1-201ENST00000432006 2976 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 AC011481.3-201ENST00000623895 5594 ntBASIC12.19□□□□□ -0.46
PARPBPQ9NWS1 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PARPBPQ9NWS1 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms