Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.95□□□□□ -0.5
CCR9P51686 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CCR9P51686 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CCR9P51686 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 GUCY2EP-203ENST00000531117 1918 ntBASIC11.95□□□□□ -0.5
CCR9P51686 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CCR9P51686 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.95□□□□□ -0.5
CCR9P51686 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 AC018735.1-201ENST00000437208 1502 ntBASIC11.95□□□□□ -0.5
CCR9P51686 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 AL358933.1-201ENST00000565046 2830 ntBASIC11.95□□□□□ -0.5
CCR9P51686 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 CTAGE13P-201ENST00000416709 2446 ntBASIC11.95□□□□□ -0.5
CCR9P51686 AC026992.2-203ENST00000563004 2419 ntBASIC11.95□□□□□ -0.5
CCR9P51686 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CCR9P51686 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCR9P51686 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.94□□□□□ -0.5
CCR9P51686 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 MIR645-201ENST00000385283 94 ntBASIC11.94□□□□□ -0.5
CCR9P51686 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.94□□□□□ -0.5
CCR9P51686 COX20P2-201ENST00000452636 358 ntBASIC11.94□□□□□ -0.5
CCR9P51686 RN7SL788P-201ENST00000460504 316 ntBASIC11.94□□□□□ -0.5
CCR9P51686 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC11.94□□□□□ -0.5
CCR9P51686 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.94□□□□□ -0.5
CCR9P51686 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 AL031587.5-201ENST00000624344 1849 ntBASIC11.94□□□□□ -0.5
CCR9P51686 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.94□□□□□ -0.5
CCR9P51686 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CCR9P51686 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCR9P51686 AL354861.3-201ENST00000600140 2412 ntBASIC11.94□□□□□ -0.5
CCR9P51686 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCR9P51686 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCR9P51686 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
CCR9P51686 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms