Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC027369.3-201ENST00000530465 3707 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SLC1A1P43005 SNORD23-201ENST00000408876 110 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC103563.1-201ENST00000429316 123 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC1A1P43005 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 NDUFS6P1-201ENST00000485187 316 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 RN7SL81P-201ENST00000493781 261 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 FAM213AP2-201ENST00000521579 683 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC1A1P43005 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC1A1P43005 RN7SL574P-201ENST00000581512 297 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AF254983.2-201ENST00000612331 135 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 VENTXP1-201ENST00000569334 2716 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLC1A1P43005 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SLC1A1P43005 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SLC1A1P43005 AC008764.8-201ENST00000623966 2717 ntBASIC14.14□□□□□ -0.15
SLC1A1P43005 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 MIR193BHG-211ENST00000641433 5365 ntBASIC14.13□□□□□ -0.15
SLC1A1P43005 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 AC099548.2-209ENST00000480264 625 ntBASIC14.13□□□□□ -0.15
SLC1A1P43005 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC1A1P43005 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC1A1P43005 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC1A1P43005 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC1A1P43005 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC1A1P43005 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC1A1P43005 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms