Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN1P35523 AC010328.2-201ENST00000597698 1111 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.44■□□□□ 0.06
CLCN1P35523 AC009884.2-201ENST00000603110 324 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 MIR6805-201ENST00000615055 62 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN1P35523 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN1P35523 AL034417.3-201ENST00000641100 1043 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN1P35523 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN1P35523 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN1P35523 ANKRD20A7P-201ENST00000402318 2414 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CLCN1P35523 AC008040.5-201ENST00000599781 1781 ntBASIC15.44■□□□□ 0.06
CLCN1P35523 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN1P35523 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLCN1P35523 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN1P35523 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN1P35523 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN1P35523 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CLCN1P35523 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN1P35523 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC15.43■□□□□ 0.06
CLCN1P35523 AC006122.1-201ENST00000493323 440 ntBASIC15.43■□□□□ 0.06
CLCN1P35523 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN1P35523 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
CLCN1P35523 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN1P35523 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 AC124068.2-201ENST00000569473 1109 ntBASIC15.43■□□□□ 0.06
CLCN1P35523 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN1P35523 AC005324.6-201ENST00000587972 613 ntBASIC15.43■□□□□ 0.06
CLCN1P35523 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN1P35523 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC15.43■□□□□ 0.06
CLCN1P35523 LAP3P2-201ENST00000454686 1454 ntBASIC15.43■□□□□ 0.06
CLCN1P35523 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC15.43■□□□□ 0.06
CLCN1P35523 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLCN1P35523 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CLCN1P35523 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLCN1P35523 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CLCN1P35523 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CLCN1P35523 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 FAM21FP-201ENST00000426241 1131 ntBASIC15.42■□□□□ 0.06
CLCN1P35523 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CLCN1P35523 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms